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Apple Pie-Stuffed Cupcakes Recipe

If you love apple pie but sometimes crave a fun, handheld treat, then you’re going to adore this Apple Pie-Stuffed Cupcakes Recipe. It’s like the best parts of a classic apple pie and a cupcake coming together in utter harmony—sweet, spiced apple filling wrapped inside tender vanilla cupcakes, topped with creamy cinnamon buttercream. Trust me, once you try these, you’ll want to make them for every holiday, potluck, or cozy night in!

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Why You’ll Love This Recipe

  • Bursting with flavor: The warm spiced apple filling melts into soft cupcakes, creating layers of comforting taste.
  • Classic made easy: Using a box mix cupcake base saves time without sacrificing homemade charm.
  • Show-stopping presentation: The cinnamon sprinkle and demerara sugar top off these cupcakes perfectly for any gathering.
  • Fun and versatile: Everyone in my family goes crazy for these, and I’ve found they’re great for tweaking seasonally too.
The image shows a cupcake with three visible layers. The bottom layer is a light yellow cake with a soft and moist texture, partially wrapped in a white cupcake liner slightly pulled down. Inside the middle layer, there are small diced apple pieces coated with a cinnamon-colored spice, giving a warm brown shade with a slightly shiny texture. The top layer is a thick swirl of white cream frosting, decorated with small sprinkles of cinnamon spice that add a light brown touch on the smooth creamy surface. The cupcake sits on a white marbled surface. Photo taken with an iphone --ar 2:3 --v 7 - Apple Pie-Stuffed Cupcakes, apple pie cupcakes, apple-filled cupcakes, cinnamon apple cupcakes, fall dessert recipes

Ingredients You’ll Need

Getting the right balance of ingredients is what makes this Apple Pie-Stuffed Cupcakes Recipe shine. The baking mix gives you a perfect vanilla base, while the freshly made apple filling adds that authentic apple pie magic. Plus, the buttercream frosting ties it all together with a cinnamon kick.

Flat lay of peeled and sliced honey crisp apples with their pale yellow and red skin edges, rich golden brown cubes of butter, a small pile of coarse brown sugar, warm cinnamon sticks alongside loose cinnamon powder, star anise pods for depth, a mound of pale beige ground nutmeg, smooth ivory sticks of vanilla, and a scattering of crystallized Demerara sugar crystals, all beautifully arranged in a natural, slightly overlapping layout with soft shadows, placed on white marbled surface, photo taken with an iphone --ar 2:3 --v 7 - Apple Pie-Stuffed Cupcakes, apple pie cupcakes, apple-filled cupcakes, cinnamon apple cupcakes, fall dessert recipes
  • Vanilla cake mix: I use a standard box mix—it’s reliable and super easy, especially when paired with simple add-ins.
  • Butter: Two types here—one for the filling and softened sticks for the silky frosting.
  • Brown sugar: Adds deep molasses flavor to the apple filling, making it richer than plain white sugar.
  • Ground cinnamon, nutmeg, ginger: The classic warm spices that transform the apples into a cozy filling.
  • Salt: Just a pinch here and there, but it really enhances the sweetness and balances flavors.
  • Honey Crisp apples: These hold shape well while getting tender, plus their sweetness is perfect for the filling.
  • Powdered sugar: For that smooth and sweet buttercream frosting.
  • Vanilla extract: A must-have for brightening the frosting.
  • Heavy cream: Helps get the frosting that heavenly light and spreadable texture.
  • Demerara sugar: For sprinkling on top, adding a delightful crunch and caramel note.
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Note: You’ll find the complete list of ingredients, along with their exact measurements, in the printable recipe card at the bottom of this post.

Variations

I love how flexible this Apple Pie-Stuffed Cupcakes Recipe is! You can easily switch things up depending on your mood, dietary needs, or the season. Feel free to get creative—I’ve found small changes make a big difference and keep the recipe exciting every time.

  • Flavored frosting: Once, I swapped half the buttercream for cream cheese frosting, and it was a tangy dream that paired perfectly with the apple filling.
  • Apple variety swap: If you don’t have Honey Crisp, Granny Smith adds more tartness, making the cupcakes wonderfully balanced.
  • Gluten-free option: Use a gluten-free vanilla cake mix and double-check your spices and sugar to keep it safe—works great for gluten sensitivities.
  • Caramel drizzle: For a real indulgence, drizzle caramel sauce over the frosting before serving—my family’s secret favorite hack.

How to Make Apple Pie-Stuffed Cupcakes Recipe

Step 1: Prepare and Bake the Cupcakes

Start by preheating your oven to 350°F and lining two 12-cup muffin tins with cupcake liners. I always use a non-stick or parchment liner to make removal easy. Follow the vanilla cake mix box instructions to prepare your batter—this keeps the cupcakes light and moist. Fill each liner about two-thirds full so there’s room for rising. Bake for 18 to 22 minutes, but don’t rely solely on the clock; stick a toothpick in the center—it should come out clean when done. Let them cool completely before moving on; this step ensures your filling and frosting don’t melt or get too messy.

Step 2: Make the Apple Pie Filling

This is where the magic happens. In a medium saucepan over medium heat, melt 4 tablespoons of butter, then stir in brown sugar and the warming spices—cinnamon, nutmeg, and ginger—plus salt. Toss in your peeled, cubed Honey Crisp apples and give everything a good mix. Let the mixture simmer gently with the lid on for about 12 minutes until the apples are soft but still hold their shape. Then remove the lid, crank the heat back up to medium, and simmer for a few more minutes so the sauce thickens to a caramel consistency. It’s tempting, but don’t rush this because the flavor intensifies beautifully as it reduces. Cool completely before filling the cupcakes.

Step 3: Whip Up the Cinnamon Buttercream

In a large bowl, beat the softened butter until it’s fluffy and pale. Slowly add powdered sugar, continuing to beat so the frosting stays smooth and lump-free. Mix in vanilla extract and heavy cream to get a creamy, spreadable consistency. Don’t forget to add a pinch of salt—it cuts through the sweetness and balances the flavors. If the frosting feels too thick, a tiny splash more cream will loosen it up perfectly. Transfer this cinnamon-kissed buttercream into a piping bag with a half-inch star tip for that classic, pretty swirl.

Step 4: Hollow Out and Stuff the Cupcakes

Once your cupcakes are cool, this is the fun part. Using a small spoon or paring knife, carefully remove the center of each cupcake, making a little well for the apple filling. I like to keep the removed cupcake pieces for a little snack—it’s the best job in the kitchen! Carefully spoon about a heaping tablespoon of the cooled apple filling into each divot. You want enough filling to get a real apple pie bite but not so much that it spills over when frosting.

Step 5: Frost and Finish

Pipe generous swirls of the cinnamon buttercream on top of each filled cupcake. For that extra touch, sprinkle demerara sugar and a pinch of cinnamon on top—this adds a lovely crunch and a pop of color. These little details take the cupcakes from great to show-stopping. I promise you’ll want your guests to ooh and ahh!

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Pro Tips for Making Apple Pie-Stuffed Cupcakes Recipe

  • Don’t skip cooling: Make sure cupcakes and filling are completely cool to prevent frosting from melting and losing shape.
  • Use a piping bag: I learned that piping frosting makes the cupcakes look more professional and cuts down on mess.
  • Control the filling amount: Too much filling makes cupcakes soggy; a heaping tablespoon is just right.
  • Keep spices balanced: Taste your filling as it cooks, and don’t be afraid to tweak spice levels to your preference.

How to Serve Apple Pie-Stuffed Cupcakes Recipe

The image shows a group of yellow cupcakes on a white plate, each topped with fluffy cream-colored frosting swirled into soft peaks and sprinkled with light brown cinnamon powder. One cupcake in the front has its white paper wrapper peeled down and a bite taken out of it, revealing a filling of small, caramel-colored apple chunks mixed with cinnamon inside the soft yellow cake. The background is a white marbled surface. The lighting is soft, bringing out the creamy and moist texture of the cupcakes. photo taken with an iphone --ar 2:3 --v 7 - Apple Pie-Stuffed Cupcakes, apple pie cupcakes, apple-filled cupcakes, cinnamon apple cupcakes, fall dessert recipes

Garnishes

I always sprinkle a little extra cinnamon and demerara sugar on top right before serving—they add sparkle and a mild crunch that’s irresistible. Sometimes I toss on a tiny leaf of fresh mint just for color, although that’s more for looks than flavor. Also, a light dusting of powdered sugar works if you want a softer finish.

Side Dishes

These cupcakes hold their own so well, but I like pairing them with a cup of hot apple cider or a scoop of vanilla ice cream alongside. For a brunch twist, serve with a sharp cheddar cheese plate—the salty-sweet combo is something my family can’t get enough of.

Creative Ways to Present

For birthdays or special events, I stack them on a tiered cupcake stand decorated with autumn leaves or mini pinecones. Another idea I tried was adding a drizzle of salted caramel sauce over each cupcake on serving platters—pure decadence! Wrapping individual cupcakes in clear cellophane and tying with twine makes a cute gift for neighbors or coworkers.

Make Ahead and Storage

Storing Leftovers

If you have leftovers (which I highly doubt!), keep them in an airtight container in the fridge. They stay fresh for up to three days that way. Just be aware the cupcake texture softens a bit as they sit with the filling and frosting—a perfectly acceptable trade-off in my book.

Freezing

I’ve frozen these cupcakes both unfrosted and fully finished. For best results, freeze the cupcakes after baking and cooling, then thaw and fill/frost later. Alternatively, frozen frosted cupcakes work fine if wrapped tightly, but frosting texture softens. Either way, they reheat beautifully after thawing.

Reheating

To warm up thawed cupcakes, I pop them in a 300°F oven for about 5 minutes, which revives the texture without melting the frosting. If you prefer, warming just the apple filling in a small pan and adding it fresh to room temperature cupcakes is a great second option.

FAQs

  1. Can I make the apple filling ahead of time?

    Absolutely! The apple pie filling can be prepared a day in advance and refrigerated. Just make sure it cools completely before storing it in an airtight container. Bring it back to room temperature or warm slightly before filling the cupcakes.

  2. What kind of apples work best for this recipe?

    Honey Crisp apples are my go-to for this recipe because they stay tender but retain a little bite after cooking. Granny Smith or Fuji apples also work well depending on how tart or sweet you prefer your filling.

  3. Can I use homemade cupcake batter instead of a box mix?

    Yes, you can definitely use your favorite homemade vanilla cupcake recipe. Just keep in mind the baking times might vary slightly, so watch for the toothpick test to know when they’re done.

  4. How do I prevent the cupcakes from getting soggy?

    Make sure your apple filling is fully cooled and thickened before filling, and don’t overfill the cupcakes. Also, store cupcakes in the fridge only once fully frosted and ideally just for a short time before serving.

  5. Can I use a different frosting for these cupcakes?

    Definitely! A cream cheese frosting pairs beautifully with apple and spices. You can either use it straight or blend it slightly with buttercream for a creamy tang that complements the filling.

Final Thoughts

I absolutely love how this Apple Pie-Stuffed Cupcakes Recipe brings together two all-time favorites into one delectable bite. What started as an experiment quickly became a family tradition; every single time I bring these to a gathering, they disappear almost instantly. If you’re looking for something easy to bake but impressive to serve, this is it. So roll up your sleeves, preheat your oven, and get ready to enjoy a little slice of apple pie heaven in cupcake form—your taste buds will thank you!

Print
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Apple Pie-Stuffed Cupcakes Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.5 from 101 reviews
  • Author: Stacy
  • Prep Time: 40 mins
  • Cook Time: 1 hr
  • Total Time: 1 hr 40 mins
  • Yield: 24 serving(s) 1x
  • Category: Dessert
  • Method: Baking
  • Cuisine: American

Description

These Apple Pie-Stuffed Cupcakes combine the classic flavors of apple pie with the convenience and charm of a cupcake. Featuring a moist vanilla cupcake base filled with a spiced apple pie filling and topped with a rich cinnamon buttercream frosting, this recipe is perfect for autumn or any cozy dessert craving.


Ingredients

Units Scale

For Cupcakes

  • 1 box of vanilla cake mix, plus ingredients called for on box

For Apple Pie Filling

  • 4 Tbsp. butter
  • 1/4 cup brown sugar
  • 1 1/2 teaspoons ground cinnamon, plus more for decorating
  • 1 1/2 tsp. ground nutmeg
  • 3/4 tsp. ground ginger
  • 1/2 tsp. salt, plus more for buttercream
  • 4 medium Honeycrisp apples, peeled and sliced into 1/2” cubes

For Icing

  • 1 1/2 cups (3 sticks) unsalted butter, softened
  • 4 cups powdered sugar
  • 2 tsp. vanilla extract
  • 3 Tbsp. heavy cream
  • Demerara sugar and cinnamon, for sprinkling

Instructions

  1. Preheat and Prepare Muffin Tins: Preheat your oven to 350ºF (175ºC) and line two 12-cup muffin tins with cupcake liners to ensure easy removal after baking.
  2. Make Cupcake Batter and Bake: Prepare the vanilla cake batter according to the package directions. Scoop the batter evenly into the cupcake liners. Bake for 18-22 minutes or until a toothpick inserted in the center comes out clean. Allow cupcakes to cool completely before proceeding.
  3. Make Apple Pie Filling: In a medium saucepan, melt butter over medium heat. Stir in brown sugar, cinnamon, nutmeg, ginger, salt, and the cubed apples. Bring the mixture to a simmer, then reduce heat to low and cover with a lid. Cook until apples are very tender, about 12 minutes. Remove the lid, increase heat to medium, and simmer to reduce the sauce into a thin caramel. Remove from heat and let cool completely.
  4. Prepare Cinnamon Buttercream Icing: Using a hand mixer or stand mixer fitted with a paddle attachment, beat softened butter in a large bowl until fluffy. Gradually add powdered sugar and continue beating until combined. Mix in vanilla extract, heavy cream, and a pinch of salt, beating until smooth and creamy. Add more heavy cream if necessary to loosen the frosting. Transfer the frosting into a piping bag fitted with a ½” star tip.
  5. Core the Cupcakes: Using a small scoop or a paring knife, carefully remove the centers of each cooled cupcake to create a hollow space for the filling.
  6. Fill and Decorate the Cupcakes: Spoon a heaping tablespoon of the apple pie filling into each cupcake cavity. Pipe the cinnamon buttercream frosting on top of each cupcake. Finally, sprinkle with demerara sugar and a dash of cinnamon for an added crunch and flavor boost.

Notes

  • Use Honeycrisp apples or other firm, tart apples to ensure they hold their shape in the filling.
  • Make sure cupcakes are completely cool before coring to prevent breakage.
  • You can prepare the apple filling a day ahead and refrigerate it to save time.
  • Frost the cupcakes just before serving to maintain the fresh texture of the buttercream.
  • If you prefer less sweetness, adjust the amount of powdered sugar in the frosting accordingly.

Nutrition

  • Serving Size: 1 cupcake
  • Calories: 350
  • Sugar: 28g
  • Sodium: 180mg
  • Fat: 18g
  • Saturated Fat: 11g
  • Unsaturated Fat: 6g
  • Trans Fat: 0.3g
  • Carbohydrates: 44g
  • Fiber: 2g
  • Protein: 2g
  • Cholesterol: 55mg

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